HCSGD entry for NSFL1C
1. General information
| Official gene symbol | NSFL1C |
|---|---|
| Entrez ID | 55968 |
| Gene full name | NSFL1 (p97) cofactor (p47) |
| Other gene symbols | P47 UBX1 UBXD10 UBXN2C dJ776F14.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005694 | Chromosome | IEA | cellular_component |
| GO:0005795 | Golgi stack | IEA | cellular_component |
| GO:0008289 | Lipid binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4991838646 | 0.8501707534 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2642747298 |
| GSE13712_SHEAR | Up | 0.1792634654 |
| GSE13712_STATIC | Up | 0.1485157017 |
| GSE19018 | Up | 0.0852497498 |
| GSE19899_A1 | Down | -0.1706528185 |
| GSE19899_A2 | Up | 0.1444671624 |
| PubMed_21979375_A1 | Up | 0.2143475002 |
| PubMed_21979375_A2 | Down | -0.1080946585 |
| GSE35957 | Down | -0.1642866585 |
| GSE36640 | Up | 0.0675938283 |
| GSE54402 | Up | 0.0746787828 |
| GSE9593 | Up | 0.0811827839 |
| GSE43922 | Down | -0.1240132069 |
| GSE24585 | Up | 0.1658622777 |
| GSE37065 | Up | 0.1460890231 |
| GSE28863_A1 | Down | -0.0563763053 |
| GSE28863_A2 | Down | -0.0027009568 |
| GSE28863_A3 | Down | -0.1692561201 |
| GSE28863_A4 | Up | 0.1094719480 |
| GSE48662 | Up | 0.0731261896 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019752 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-142-3p | MIMAT0000434 | MIRT021624 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-146b-5p | MIMAT0002809 | MIRT041619 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042168 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044711 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049768 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
