HCSGD entry for BIN3
1. General information
| Official gene symbol | BIN3 |
|---|---|
| Entrez ID | 55909 |
| Gene full name | bridging integrator 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000910 | Cytokinesis | NAS | biological_process |
| GO:0000917 | Barrier septum assembly | IEA | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0007015 | Actin filament organization | NAS | biological_process |
| GO:0008093 | Cytoskeletal adaptor activity | NAS | molecular_function |
| GO:0008104 | Protein localization | IMP | biological_process |
| GO:0009826 | Unidimensional cell growth | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7330930968 | 0.7583464572 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1397689133 |
| GSE13712_SHEAR | Down | -0.2310238289 |
| GSE13712_STATIC | Up | 0.0814289993 |
| GSE19018 | Down | -0.0750873708 |
| GSE19899_A1 | Up | 0.0265357982 |
| GSE19899_A2 | Up | 0.0416053385 |
| PubMed_21979375_A1 | Up | 0.1582164312 |
| PubMed_21979375_A2 | Up | 0.1395127847 |
| GSE35957 | Down | -0.1078225474 |
| GSE36640 | Up | 0.1192192028 |
| GSE54402 | Up | 0.1289383913 |
| GSE9593 | Down | -0.0489669973 |
| GSE43922 | Up | 0.0342213895 |
| GSE24585 | Down | -0.0902825722 |
| GSE37065 | Down | -0.0250344614 |
| GSE28863_A1 | Up | 0.0836682308 |
| GSE28863_A2 | Up | 0.0466196053 |
| GSE28863_A3 | Down | -0.1152284086 |
| GSE28863_A4 | Up | 0.0877011453 |
| GSE48662 | Down | -0.2428503086 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-196a-5p | MIMAT0000226 | MIRT026045 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027575 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032138 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045640 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
