HCSGD entry for TXLNG
1. General information
| Official gene symbol | TXLNG |
|---|---|
| Entrez ID | 55787 |
| Gene full name | taxilin gamma |
| Other gene symbols | CXorf15 ELRG FIAT LSR5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005829 | Cytosol | ISS | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0007049 | Cell cycle | IEA | biological_process |
| GO:0010564 | Regulation of cell cycle process | IMP | biological_process |
| GO:0019905 | Syntaxin binding | IEA | molecular_function |
| GO:0030500 | Regulation of bone mineralization | ISS | biological_process |
| GO:0031965 | Nuclear membrane | IDA | cellular_component |
| GO:0046982 | Protein heterodimerization activity | IDA | molecular_function |
| GO:0051726 | Regulation of cell cycle | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0158280043 | 0.9034847574 | 0.3110922388 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0187449876 |
| GSE13712_SHEAR | Up | 0.1230649255 |
| GSE13712_STATIC | Up | 0.3719074431 |
| GSE19018 | Down | -0.1998137855 |
| GSE19899_A1 | Up | 0.5104748364 |
| GSE19899_A2 | Up | 0.7520446254 |
| PubMed_21979375_A1 | Up | 0.8757166321 |
| PubMed_21979375_A2 | Up | 0.8134406778 |
| GSE35957 | Up | 0.0802556732 |
| GSE36640 | Down | -0.6647657378 |
| GSE54402 | Up | 0.2233245044 |
| GSE9593 | Down | -0.1330510170 |
| GSE43922 | Up | 0.5677895821 |
| GSE24585 | Down | -0.6166352195 |
| GSE37065 | Up | 0.4256697857 |
| GSE28863_A1 | Up | 0.2883962371 |
| GSE28863_A2 | Up | 0.4713274027 |
| GSE28863_A3 | Down | -0.0301430411 |
| GSE28863_A4 | Up | 0.2185066276 |
| GSE48662 | Up | 0.4614417841 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-340-5p | MIMAT0004692 | MIRT019585 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027599 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-550a-3p | MIMAT0003257 | MIRT040501 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-26a-5p | MIMAT0000082 | MIRT050092 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051225 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
