HCSGD entry for MBD5
1. General information
| Official gene symbol | MBD5 |
|---|---|
| Entrez ID | 55777 |
| Gene full name | methyl-CpG binding domain protein 5 |
| Other gene symbols | MRD1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IDA IEA | molecular_function |
| GO:0003682 | Chromatin binding | IDA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005694 | Chromosome | IEA | cellular_component |
| GO:0040014 | Regulation of multicellular organism growth | IEA | biological_process |
| GO:0042593 | Glucose homeostasis | IEA | biological_process |
| GO:0060399 | Positive regulation of growth hormone receptor signaling pathway | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2974040956 | 0.3276331332 | 0.9965545570 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1463498313 |
| GSE13712_SHEAR | Down | -0.0287404437 |
| GSE13712_STATIC | Up | 0.2408003888 |
| GSE19018 | Up | 0.4845826791 |
| GSE19899_A1 | Up | 0.0822192835 |
| GSE19899_A2 | Down | -0.4441159365 |
| PubMed_21979375_A1 | Down | -0.3395940254 |
| PubMed_21979375_A2 | Down | -0.1707429455 |
| GSE35957 | Up | 0.1882286825 |
| GSE36640 | Up | 0.1938708162 |
| GSE54402 | Down | -0.1358071255 |
| GSE9593 | Down | -0.0400702496 |
| GSE43922 | Down | -0.1412451101 |
| GSE24585 | Up | 0.5907237858 |
| GSE37065 | Up | 0.3170170704 |
| GSE28863_A1 | Up | 0.3436353283 |
| GSE28863_A2 | Up | 0.1241184470 |
| GSE28863_A3 | Down | -0.3932095445 |
| GSE28863_A4 | Down | -0.2918276191 |
| GSE48662 | Down | -0.0642126925 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016873 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
