HCSGD entry for RUFY2
1. General information
| Official gene symbol | RUFY2 |
|---|---|
| Entrez ID | 55680 |
| Gene full name | RUN and FYVE domain containing 2 |
| Other gene symbols | RABIP4R ZFYVE13 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9089305194 | 0.3030928992 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1154394920 |
| GSE13712_SHEAR | Up | 0.1364145876 |
| GSE13712_STATIC | Down | -0.0092939524 |
| GSE19018 | Up | 0.1166714240 |
| GSE19899_A1 | Down | -0.0518349879 |
| GSE19899_A2 | Down | -0.5776235160 |
| PubMed_21979375_A1 | Down | -0.2358991694 |
| PubMed_21979375_A2 | Down | -0.6318120378 |
| GSE35957 | Down | -0.1143417146 |
| GSE36640 | Up | 0.0061763104 |
| GSE54402 | Down | -0.2630574997 |
| GSE9593 | Down | -0.0390169937 |
| GSE43922 | Up | 0.0125288949 |
| GSE24585 | Up | 0.2428627380 |
| GSE37065 | Up | 0.0061233033 |
| GSE28863_A1 | Up | 0.1946711982 |
| GSE28863_A2 | Up | 0.0549874806 |
| GSE28863_A3 | Down | -0.2047308654 |
| GSE28863_A4 | Up | 0.1007339603 |
| GSE48662 | Down | -0.0803977151 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017147 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-425-5p | MIMAT0003393 | MIRT039337 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048254 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050604 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
