HCSGD entry for DENND4C

1. General information

Official gene symbolDENND4C
Entrez ID55667
Gene full nameDENN/MADD domain containing 4C
Other gene symbolsC9orf55 C9orf55B bA513M16.3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005829CytosolISScellular_component
GO:0005886Plasma membraneISScellular_component
GO:0015031Protein transportIEAbiological_process
GO:0017112Rab guanyl-nucleotide exchange factor activityIDAmolecular_function
GO:0030659Cytoplasmic vesicle membraneIEAcellular_component
GO:0030904Retromer complexIEAcellular_component
GO:0032313Regulation of Rab GTPase activityIDAbiological_process
GO:0032318Regulation of Ras GTPase activityIDAbiological_process
GO:0032593Insulin-responsive compartmentISScellular_component
GO:0032869Cellular response to insulin stimulusISSbiological_process
GO:0043087Regulation of GTPase activityIDAbiological_process
GO:0072659Protein localization to plasma membraneISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.44116248620.51055695830.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0933718055
GSE13712_SHEARUp0.2531853337
GSE13712_STATICUp0.0871758035
GSE19018Up0.1978107430
GSE19899_A1Down-0.1203708876
GSE19899_A2Up0.0379156191
PubMed_21979375_A1Down-0.3358557872
PubMed_21979375_A2Down-0.0141292967
GSE35957Down-0.0494252875
GSE36640Up0.2552280081
GSE54402Down-0.1017937086
GSE9593Up0.1778722881
GSE43922Down-0.0280722966
GSE24585Up0.1768418259
GSE37065Up0.3204856435
GSE28863_A1Up0.1809648526
GSE28863_A2Up0.1201539498
GSE28863_A3Down-1.0752077371
GSE28863_A4Up0.0933570828
GSE48662Down-0.0429658004

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.