HCSGD entry for ZNF416
1. General information
| Official gene symbol | ZNF416 |
|---|---|
| Entrez ID | 55659 |
| Gene full name | zinc finger protein 416 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1850339121 | 0.6381437711 | 0.8407176938 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1799224561 |
| GSE13712_SHEAR | Down | -0.1060312158 |
| GSE13712_STATIC | Up | 0.1288239891 |
| GSE19018 | Down | -0.2082306107 |
| GSE19899_A1 | Up | 0.1288723276 |
| GSE19899_A2 | Up | 0.2400888783 |
| PubMed_21979375_A1 | Up | 1.0234212969 |
| PubMed_21979375_A2 | Up | 0.5818346426 |
| GSE35957 | Up | 0.0874273001 |
| GSE36640 | Up | 0.3874279889 |
| GSE54402 | Up | 0.1729757255 |
| GSE9593 | Up | 0.3330000399 |
| GSE43922 | Up | 0.1233358065 |
| GSE24585 | Down | -0.1537637287 |
| GSE37065 | Down | -0.0470241844 |
| GSE28863_A1 | Down | -0.3805763446 |
| GSE28863_A2 | Down | -0.3933843175 |
| GSE28863_A3 | Down | -0.4104266266 |
| GSE28863_A4 | Down | -0.0055263425 |
| GSE48662 | Up | 0.1387118454 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-200c-3p | MIMAT0000617 | MIRT044380 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
