HCSGD entry for NHP2
1. General information
| Official gene symbol | NHP2 |
|---|---|
| Entrez ID | 55651 |
| Gene full name | NHP2 ribonucleoprotein |
| Other gene symbols | DKCB2 NHP2P NOLA2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005730 | Nucleolus | IEA | cellular_component |
| GO:0005732 | Small nucleolar ribonucleoprotein complex | ISS | cellular_component |
| GO:0015030 | Cajal body | IEA | cellular_component |
| GO:0030515 | SnoRNA binding | ISS | molecular_function |
| GO:0031118 | RRNA pseudouridine synthesis | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2489012462 | 0.1039134341 | 0.9371875983 | 0.6180299141 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3901679313 |
| GSE13712_SHEAR | Down | -0.0825438232 |
| GSE13712_STATIC | Down | -0.0110369008 |
| GSE19018 | Up | 0.1597601152 |
| GSE19899_A1 | Down | -0.1028796231 |
| GSE19899_A2 | Up | 0.0852841037 |
| PubMed_21979375_A1 | Up | 0.7893444725 |
| PubMed_21979375_A2 | Up | 0.1355227051 |
| GSE35957 | Down | -0.3977366043 |
| GSE36640 | Down | -0.6387398641 |
| GSE54402 | Up | 0.3535914160 |
| GSE9593 | Down | -0.2777985053 |
| GSE43922 | Up | 0.1081954901 |
| GSE24585 | Down | -1.0901800851 |
| GSE37065 | Down | -0.3467969186 |
| GSE28863_A1 | Up | 0.0103800398 |
| GSE28863_A2 | Down | -0.5590921961 |
| GSE28863_A3 | Up | 0.3173077364 |
| GSE28863_A4 | Up | 0.3379437770 |
| GSE48662 | Down | -0.2439190034 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-330-5p | MIMAT0004693 | MIRT038252 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042952 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050265 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
