HCSGD entry for SYBU
1. General information
| Official gene symbol | SYBU |
|---|---|
| Entrez ID | 55638 |
| Gene full name | syntabulin (syntaxin-interacting) |
| Other gene symbols | GOLSYN OCSYN SNPHL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0008017 | Microtubule binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016023 | Cytoplasmic membrane-bounded vesicle | IEA | cellular_component |
| GO:0017075 | Syntaxin-1 binding | IEA | molecular_function |
| GO:0019894 | Kinesin binding | IEA | molecular_function |
| GO:0061178 | Regulation of insulin secretion involved in cellular response to glucose stimulus | IEA | biological_process |
| GO:0097433 | Dense body | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7114839672 | 0.0708283082 | 0.9999902473 | 0.5024991644 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1574832996 |
| GSE13712_SHEAR | Down | -0.7427310563 |
| GSE13712_STATIC | Down | -0.8554882928 |
| GSE19018 | Down | -0.1236821532 |
| GSE19899_A1 | Down | -0.0197865943 |
| GSE19899_A2 | Down | -0.1060369933 |
| PubMed_21979375_A1 | Up | 0.5477500975 |
| PubMed_21979375_A2 | Down | -0.1816220601 |
| GSE35957 | Down | -0.1801649279 |
| GSE36640 | Up | 0.7716647162 |
| GSE54402 | Down | -0.1327152441 |
| GSE9593 | Up | 0.2934370332 |
| GSE43922 | Up | 0.0185383651 |
| GSE24585 | Down | -0.5406852442 |
| GSE37065 | Down | -0.5376822212 |
| GSE28863_A1 | Down | -0.0386504644 |
| GSE28863_A2 | Up | 0.1341635147 |
| GSE28863_A3 | Up | 0.2198060815 |
| GSE28863_A4 | Down | -0.0450198751 |
| GSE48662 | Up | 0.2781083363 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020241 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT027999 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-32-5p | MIMAT0000090 | MIRT028295 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031204 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
