HCSGD entry for ZNF407
1. General information
| Official gene symbol | ZNF407 |
|---|---|
| Entrez ID | 55628 |
| Gene full name | zinc finger protein 407 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4768928536 | 0.7905435698 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0251163557 |
| GSE13712_SHEAR | Up | 0.2882240392 |
| GSE13712_STATIC | Up | 0.0873385773 |
| GSE19018 | Down | -0.3004889583 |
| GSE19899_A1 | Down | -0.1367600840 |
| GSE19899_A2 | Up | 0.0047310961 |
| PubMed_21979375_A1 | Up | 0.5156998033 |
| PubMed_21979375_A2 | Up | 0.4016406095 |
| GSE35957 | Down | -0.1272813651 |
| GSE36640 | Down | -0.2116297171 |
| GSE54402 | Up | 0.0950074234 |
| GSE9593 | Up | 0.1002799046 |
| GSE43922 | Up | 0.0630603464 |
| GSE24585 | Down | -0.2889933358 |
| GSE37065 | Up | 0.0609451996 |
| GSE28863_A1 | Up | 0.3699489246 |
| GSE28863_A2 | Up | 0.1486607640 |
| GSE28863_A3 | Down | -0.0203204043 |
| GSE28863_A4 | Down | -0.0176636855 |
| GSE48662 | Down | -0.0713944202 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-9-5p | MIMAT0000441 | MIRT021370 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-218-5p | MIMAT0000275 | MIRT046990 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
