HCSGD entry for ZNF280C
1. General information
| Official gene symbol | ZNF280C |
|---|---|
| Entrez ID | 55609 |
| Gene full name | zinc finger protein 280C |
| Other gene symbols | SUHW3 ZNF633 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3197264162 | 0.1008327913 | 0.9999902473 | 0.6083016044 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4350119485 |
| GSE13712_SHEAR | Up | 0.1359577421 |
| GSE13712_STATIC | Up | 0.1543592532 |
| GSE19018 | Down | -0.3570836720 |
| GSE19899_A1 | Up | 0.2030885399 |
| GSE19899_A2 | Up | 0.5396436678 |
| PubMed_21979375_A1 | Up | 1.7311817904 |
| PubMed_21979375_A2 | Up | 0.3246428215 |
| GSE35957 | Down | -1.1845251164 |
| GSE36640 | Down | -0.6573518321 |
| GSE54402 | Up | 0.2520097426 |
| GSE9593 | Down | -0.5540890800 |
| GSE43922 | Up | 0.0672357419 |
| GSE24585 | Up | 0.2974797640 |
| GSE37065 | Down | -0.0080160776 |
| GSE28863_A1 | Up | 0.0603820827 |
| GSE28863_A2 | Down | -0.1229160871 |
| GSE28863_A3 | Down | -0.6197471319 |
| GSE28863_A4 | Up | 0.0382176821 |
| GSE48662 | Down | -0.3333563585 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023917 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-421 | MIMAT0003339 | MIRT039402 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-195-5p | MIMAT0000461 | MIRT044863 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051185 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
