HCSGD entry for PPP1R9A
1. General information
| Official gene symbol | PPP1R9A |
|---|---|
| Entrez ID | 55607 |
| Gene full name | protein phosphatase 1, regulatory subunit 9A |
| Other gene symbols | NRB1 NRBI Neurabin-I |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0007015 | Actin filament organization | IEA | biological_process |
| GO:0019722 | Calcium-mediated signaling | IEA | biological_process |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030175 | Filopodium | IEA | cellular_component |
| GO:0030426 | Growth cone | IEA | cellular_component |
| GO:0030864 | Cortical actin cytoskeleton | IEA | cellular_component |
| GO:0031175 | Neuron projection development | IEA | biological_process |
| GO:0043197 | Dendritic spine | IEA | cellular_component |
| GO:0045202 | Synapse | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4159536492 | 0.7754937616 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0490880122 |
| GSE13712_SHEAR | Down | -0.6893786345 |
| GSE13712_STATIC | Down | -0.3747214929 |
| GSE19018 | Up | 0.0723193669 |
| GSE19899_A1 | Up | 0.0548569421 |
| GSE19899_A2 | Up | 0.1013486262 |
| PubMed_21979375_A1 | Up | 0.0362851949 |
| PubMed_21979375_A2 | Up | 0.0769962621 |
| GSE35957 | Up | 0.1037154691 |
| GSE36640 | Up | 0.0245007272 |
| GSE54402 | Up | 0.0202207764 |
| GSE9593 | Up | 0.0220659721 |
| GSE43922 | Up | 0.0181653646 |
| GSE24585 | Up | 0.2513062327 |
| GSE37065 | Up | 0.0664331621 |
| GSE28863_A1 | Down | -0.1001073110 |
| GSE28863_A2 | Up | 1.0261078030 |
| GSE28863_A3 | Up | 0.0916277835 |
| GSE28863_A4 | Down | -0.0480780830 |
| GSE48662 | Down | -0.0094021307 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018967 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020286 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-33a-5p | MIMAT0000091 | MIRT028245 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT047338 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
