HCSGD entry for ZCCHC8
1. General information
| Official gene symbol | ZCCHC8 |
|---|---|
| Entrez ID | 55596 |
| Gene full name | zinc finger, CCHC domain containing 8 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000398 | MRNA splicing, via spliceosome | IC | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0071013 | Catalytic step 2 spliceosome | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5073856160 | 0.0613733635 | 0.9999902473 | 0.4666276639 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4897074777 |
| GSE13712_SHEAR | Up | 0.4252571377 |
| GSE13712_STATIC | Up | 0.2230652775 |
| GSE19018 | Down | -0.1914665897 |
| GSE19899_A1 | Down | -0.2101372086 |
| GSE19899_A2 | Down | -0.3331462902 |
| PubMed_21979375_A1 | Up | 1.3639428039 |
| PubMed_21979375_A2 | Down | -0.5160969230 |
| GSE35957 | Down | -0.1511649560 |
| GSE36640 | Down | -0.8927246726 |
| GSE54402 | Down | -0.2477639036 |
| GSE9593 | Down | -0.4822940920 |
| GSE43922 | Up | 0.0277196349 |
| GSE24585 | Up | 0.3604014268 |
| GSE37065 | Down | -0.0202025536 |
| GSE28863_A1 | Up | 0.3252442447 |
| GSE28863_A2 | Up | 0.1879914186 |
| GSE28863_A3 | Down | -0.5583734887 |
| GSE28863_A4 | Up | 0.1486122044 |
| GSE48662 | Down | -0.0950343016 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028967 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
