HCSGD entry for CHRNA9

1. General information

Official gene symbolCHRNA9
Entrez ID55584
Gene full namecholinergic receptor, nicotinic, alpha 9 (neuronal)
Other gene symbolsHSA243342 NACHRA9
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0004889Acetylcholine-activated cation-selective channel activityIEAmolecular_function
GO:0005262Calcium channel activityIEAmolecular_function
GO:0005886Plasma membraneTAScellular_component
GO:0005892Acetylcholine-gated channel complexIEAcellular_component
GO:0007204Positive regulation of cytosolic calcium ion concentrationIGIbiological_process
GO:0007268Synaptic transmissionTASbiological_process
GO:0030054Cell junctionIEAcellular_component
GO:0042472Inner ear morphogenesisIEAbiological_process
GO:0045211Postsynaptic membraneIEAcellular_component
GO:0050910Detection of mechanical stimulus involved in sensory perception of soundIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.00594198930.99432184570.20337984401.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2226058521
GSE13712_SHEARUp0.3467951815
GSE13712_STATICUp0.0546412236
GSE19018Up0.0913844731
GSE19899_A1Up0.3679918396
GSE19899_A2Up1.4677308583
PubMed_21979375_A1Up0.0959636653
PubMed_21979375_A2Up2.9515219474
GSE35957Down-0.0157671995
GSE36640Up0.2675283161
GSE54402Up0.2598890793
GSE9593Up0.2711968621
GSE43922Up1.8996094240
GSE24585Up0.1083542616
GSE37065Up0.3002398544
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.0254682573

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

NicotineDB00184 APRD00200 | EXPT02315 | DB09463
GalantamineDB00674 APRD00206 | EXPT01628
ATG003DB05069 -
LobelineDB05137 -
RPI-78MDB05740 -
TetraethylammoniumDB08837 -

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-98-5pMIMAT0000096MIRT027427MicroarrayFunctional MTI (Weak)19088304
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.