HCSGD entry for GALNT10
1. General information
| Official gene symbol | GALNT10 |
|---|---|
| Entrez ID | 55568 |
| Gene full name | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) |
| Other gene symbols | GALNACT10 PPGALNACT10 PPGANTASE10 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0004653 | Polypeptide N-acetylgalactosaminyltransferase activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016266 | O-glycan processing | TAS | biological_process |
| GO:0016757 | Transferase activity, transferring glycosyl groups | IEA | molecular_function |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5193759432 | 0.0455852665 | 0.9999902473 | 0.4005978993 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.0176218009 |
| GSE13712_SHEAR | Up | 0.4461987638 |
| GSE13712_STATIC | Up | 0.1113573794 |
| GSE19018 | Down | -0.1565228934 |
| GSE19899_A1 | Down | -0.4194428905 |
| GSE19899_A2 | Up | 0.0486004659 |
| PubMed_21979375_A1 | Down | -1.4382149076 |
| PubMed_21979375_A2 | Up | 0.2466762654 |
| GSE35957 | Up | 0.2225751598 |
| GSE36640 | Up | 1.2199028058 |
| GSE54402 | Down | -0.1613924883 |
| GSE9593 | Up | 0.5804382478 |
| GSE43922 | Down | -0.4411954214 |
| GSE24585 | Down | -0.0946535095 |
| GSE37065 | Down | -0.4559807467 |
| GSE28863_A1 | Down | -0.0018598993 |
| GSE28863_A2 | Up | 0.0822412482 |
| GSE28863_A3 | Down | -0.5184438858 |
| GSE28863_A4 | Down | -0.0986473579 |
| GSE48662 | Up | 0.0972988237 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT003102 | Luciferase reporter assay//qRT-PCR | Functional MTI | 19296470 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
