HCSGD entry for TMEM55A
1. General information
| Official gene symbol | TMEM55A |
|---|---|
| Entrez ID | 55529 |
| Gene full name | transmembrane protein 55A |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005765 | Lysosomal membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016787 | Hydrolase activity | IEA | molecular_function |
| GO:0031902 | Late endosome membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0204421717 | 0.8790004939 | 0.3435877395 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5225433291 |
| GSE13712_SHEAR | Down | -0.5150601573 |
| GSE13712_STATIC | Up | 0.1082929194 |
| GSE19018 | Down | -0.0634324358 |
| GSE19899_A1 | Up | 1.0609417622 |
| GSE19899_A2 | Up | 0.1220480604 |
| PubMed_21979375_A1 | Down | -0.3012389019 |
| PubMed_21979375_A2 | Up | 0.4750498248 |
| GSE35957 | Up | 0.3074410654 |
| GSE36640 | Up | 0.5324191711 |
| GSE54402 | Up | 0.1792727207 |
| GSE9593 | Up | 0.6186427335 |
| GSE43922 | Up | 0.3111461683 |
| GSE24585 | Down | -0.2857550601 |
| GSE37065 | Up | 0.3684470527 |
| GSE28863_A1 | Up | 0.1238036516 |
| GSE28863_A2 | Up | 0.3367926870 |
| GSE28863_A3 | Down | -0.6493477253 |
| GSE28863_A4 | Up | 0.2555018193 |
| GSE48662 | Down | -0.1313819728 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019749 | Microarray | Functional MTI (Weak) | 20215506 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
