HCSGD entry for BATF3
1. General information
| Official gene symbol | BATF3 |
|---|---|
| Entrez ID | 55509 |
| Gene full name | basic leucine zipper transcription factor, ATF-like 3 |
| Other gene symbols | JDP1 JUNDM1 SNFT |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0003714 | Transcription corepressor activity | TAS | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0009615 | Response to virus | ISS | biological_process |
| GO:0043011 | Myeloid dendritic cell differentiation | ISS | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:0097028 | Dendritic cell differentiation | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9783468789 | 0.0223190114 | 0.9999902473 | 0.2869851979 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0481714964 |
| GSE13712_SHEAR | Down | -0.1934291740 |
| GSE13712_STATIC | Down | -0.2758212591 |
| GSE19018 | Down | -0.0829222302 |
| GSE19899_A1 | Down | -0.3518466977 |
| GSE19899_A2 | Down | -0.7650693570 |
| PubMed_21979375_A1 | Down | -0.0536945875 |
| PubMed_21979375_A2 | Down | -1.0328696600 |
| GSE35957 | Down | -0.6996464182 |
| GSE36640 | Down | -1.3751136996 |
| GSE54402 | Up | 0.1505331233 |
| GSE9593 | Down | -0.4484982582 |
| GSE43922 | Down | -0.1427595084 |
| GSE24585 | Down | -0.1451310308 |
| GSE37065 | Up | 0.0108424933 |
| GSE28863_A1 | Down | -0.1734502349 |
| GSE28863_A2 | Up | 0.0828365631 |
| GSE28863_A3 | Up | 0.1638823499 |
| GSE28863_A4 | Up | 0.0772550562 |
| GSE48662 | Down | -0.3791252549 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030114 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
