HCSGD entry for NOP10
1. General information
| Official gene symbol | NOP10 |
|---|---|
| Entrez ID | 55505 |
| Gene full name | NOP10 ribonucleoprotein |
| Other gene symbols | DKCB1 NOLA3 NOP10P |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001522 | Pseudouridine synthesis | NAS | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005730 | Nucleolus | IEA | cellular_component |
| GO:0005732 | Small nucleolar ribonucleoprotein complex | TAS | cellular_component |
| GO:0006364 | RRNA processing | IEA | biological_process |
| GO:0015030 | Cajal body | IEA | cellular_component |
| GO:0030515 | SnoRNA binding | IEA | molecular_function |
| GO:0072588 | Box H/ACA RNP complex | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0112560579 | 0.9738491015 | 0.2682689531 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5630902929 |
| GSE13712_SHEAR | Up | 0.2510968815 |
| GSE13712_STATIC | Up | 0.2756870306 |
| GSE19018 | Up | 0.0613621992 |
| GSE19899_A1 | Up | 0.6582746000 |
| GSE19899_A2 | Up | 0.6749505090 |
| PubMed_21979375_A1 | Up | 1.1166266899 |
| PubMed_21979375_A2 | Up | 0.5578198978 |
| GSE35957 | Down | -0.1464420115 |
| GSE36640 | Up | 0.2871906590 |
| GSE54402 | Up | 0.7736479976 |
| GSE9593 | Up | 0.2760515524 |
| GSE43922 | Up | 0.4073168691 |
| GSE24585 | Down | -0.0781558906 |
| GSE37065 | Down | -0.1351400073 |
| GSE28863_A1 | Down | -0.2434588676 |
| GSE28863_A2 | Up | 0.2298263166 |
| GSE28863_A3 | Down | -0.2497694781 |
| GSE28863_A4 | Up | 0.3641257427 |
| GSE48662 | Down | -0.1605055113 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029941 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031870 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-151a-5p | MIMAT0004697 | MIRT038200 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
