HCSGD entry for PRB1
1. General information
| Official gene symbol | PRB1 |
|---|---|
| Entrez ID | 5542 |
| Gene full name | proline-rich protein BstNI subfamily 1 |
| Other gene symbols | PM PMF PMS PRB1L PRB1M |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4012788838 | 0.8988849284 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0445920205 |
| GSE13712_SHEAR | Up | 0.1146638816 |
| GSE13712_STATIC | Up | 0.0856474192 |
| GSE19018 | Up | 0.2201923834 |
| GSE19899_A1 | Down | -0.0255605011 |
| GSE19899_A2 | Up | 0.1218200171 |
| PubMed_21979375_A1 | Down | -0.0749378997 |
| PubMed_21979375_A2 | Up | 0.0345420655 |
| GSE35957 | Up | 0.3119227810 |
| GSE36640 | Down | -0.0140396093 |
| GSE54402 | Down | -0.0168977973 |
| GSE9593 | Down | -0.0455699758 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.0884610465 |
| GSE28863_A2 | Down | -0.2230462052 |
| GSE28863_A3 | Up | 0.4757508711 |
| GSE28863_A4 | Down | -0.0694699232 |
| GSE48662 | Up | 0.1397859768 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 2 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 15135637 | Using peptide mass fingerprinting (PMF) to search the nrNCBI database, we identified 22 proteins |
| 7908266 | Normal human embryonic lung fibroblasts WI-38 differentiate spontaneously along the cell lineage mitotic fibroblasts (MF) I, II, and III and postmitotic fibroblasts (PMF) IV, V, VI, and VII in the fibroblast stem cell system in vitro, when appropriate methods are applied |
| 7908266 | Spontaneously arisen and experimentally induced (2 x MMC) PMF have the same morphological and biochemical characteristics |
| 7908266 | Spontaneously arisen and experimentally induced postmitotic populations are composed of postmitotic fibroblasts PMF IV, V, and VI with 2n, 4n, and 8n DNA |
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