HCSGD entry for COPRS
1. General information
| Official gene symbol | COPRS |
|---|---|
| Entrez ID | 55352 |
| Gene full name | coordinator of PRMT5, differentiation stimulator |
| Other gene symbols | C17orf79 COPR5 HSA272196 TTP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0007517 | Muscle organ development | IEA ISS | biological_process |
| GO:0042393 | Histone binding | IDA | molecular_function |
| GO:0043985 | Histone H4-R3 methylation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2932357395 | 0.0962846396 | 0.9935811301 | 0.5916085201 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.1091609245 |
| GSE13712_SHEAR | Down | -0.0596818826 |
| GSE13712_STATIC | Down | -0.0522039337 |
| GSE19018 | Down | -0.1421679612 |
| GSE19899_A1 | Down | -0.3573963090 |
| GSE19899_A2 | Up | 0.2083093668 |
| PubMed_21979375_A1 | Down | -1.5661169536 |
| PubMed_21979375_A2 | Down | -0.6674924582 |
| GSE35957 | Down | -0.1941934651 |
| GSE36640 | Down | -0.1441455310 |
| GSE54402 | Up | 0.7643569827 |
| GSE9593 | Up | 0.3060290289 |
| GSE43922 | Down | -0.1749118554 |
| GSE24585 | Down | -0.1926999373 |
| GSE37065 | Down | -0.1000077824 |
| GSE28863_A1 | Down | -0.2112455127 |
| GSE28863_A2 | Down | -0.0796372669 |
| GSE28863_A3 | Down | -0.0442800469 |
| GSE28863_A4 | Up | 0.2634711418 |
| GSE48662 | Down | -0.1686247946 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016471 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-421 | MIMAT0003339 | MIRT039412 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
