HCSGD entry for VNN3
1. General information
| Official gene symbol | VNN3 |
|---|---|
| Entrez ID | 55350 |
| Gene full name | vanin 3 |
| Other gene symbols | HSA238982 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0005615 | Extracellular space | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006807 | Nitrogen compound metabolic process | IEA | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0015939 | Pantothenate metabolic process | IEA | biological_process |
| GO:0016811 | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEA | molecular_function |
| GO:0017159 | Pantetheine hydrolase activity | NAS | molecular_function |
| GO:0031225 | Anchored component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2014865925 | 0.9352621177 | 0.8658495673 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1054537504 |
| GSE13712_SHEAR | Down | -0.0486888296 |
| GSE13712_STATIC | Down | -0.0424695765 |
| GSE19018 | Down | -0.0570638022 |
| GSE19899_A1 | Up | 0.0927322062 |
| GSE19899_A2 | Up | 0.6403016046 |
| PubMed_21979375_A1 | Up | 0.5978292109 |
| PubMed_21979375_A2 | Up | 0.4547402762 |
| GSE35957 | Up | 0.0837372021 |
| GSE36640 | Up | 0.2165690226 |
| GSE54402 | Up | 0.4171955171 |
| GSE9593 | Up | 0.0012255255 |
| GSE43922 | Up | 0.3481565522 |
| GSE24585 | Down | -0.1835618915 |
| GSE37065 | Up | 0.0216008535 |
| GSE28863_A1 | Up | 0.1015345392 |
| GSE28863_A2 | Up | 0.2115938880 |
| GSE28863_A3 | Up | 0.0568023244 |
| GSE28863_A4 | Down | -0.1104688227 |
| GSE48662 | Down | -0.0770915965 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
