HCSGD entry for CHDH
1. General information
| Official gene symbol | CHDH |
|---|---|
| Entrez ID | 55349 |
| Gene full name | choline dehydrogenase |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005743 | Mitochondrial inner membrane | IEA | cellular_component |
| GO:0008812 | Choline dehydrogenase activity | IEA | molecular_function |
| GO:0019285 | Glycine betaine biosynthetic process from choline | IEA | biological_process |
| GO:0050660 | Flavin adenine dinucleotide binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4126836936 | 0.8306470841 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0256628894 |
| GSE13712_SHEAR | Down | -0.0168432402 |
| GSE13712_STATIC | Down | -0.0827297721 |
| GSE19018 | Down | -0.0426370693 |
| GSE19899_A1 | Up | 0.0472811436 |
| GSE19899_A2 | Up | 0.0299869948 |
| PubMed_21979375_A1 | Down | -0.0003314848 |
| PubMed_21979375_A2 | Down | -0.1446718592 |
| GSE35957 | Up | 0.1438164402 |
| GSE36640 | Down | -0.0174798751 |
| GSE54402 | Up | 0.0054839126 |
| GSE9593 | Up | 0.0415182124 |
| GSE43922 | Up | 0.0810253576 |
| GSE24585 | Down | -0.4519298070 |
| GSE37065 | Down | -0.0549597888 |
| GSE28863_A1 | Up | 0.2604895850 |
| GSE28863_A2 | Up | 0.9706840071 |
| GSE28863_A3 | Up | 0.2707654322 |
| GSE28863_A4 | Up | 0.1390008166 |
| GSE48662 | Down | -0.0727717829 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016262 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026237 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
