HCSGD entry for SLC35C1
1. General information
| Official gene symbol | SLC35C1 |
|---|---|
| Entrez ID | 55343 |
| Gene full name | solute carrier family 35, member C1 |
| Other gene symbols | CDG2C FUCT1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0008643 | Carbohydrate transport | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030259 | Lipid glycosylation | IEA | biological_process |
| GO:0045746 | Negative regulation of Notch signaling pathway | IEA | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0274700733 | 0.9392636032 | 0.3845956383 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2739124576 |
| GSE13712_SHEAR | Up | 0.3067201449 |
| GSE13712_STATIC | Up | 0.3658826988 |
| GSE19018 | Up | 0.0154103658 |
| GSE19899_A1 | Up | 0.2213599094 |
| GSE19899_A2 | Up | 1.5264896181 |
| PubMed_21979375_A1 | Up | 0.9344891056 |
| PubMed_21979375_A2 | Up | 1.3670070167 |
| GSE35957 | Down | -0.2774265935 |
| GSE36640 | Up | 0.2865960219 |
| GSE54402 | Up | 0.2328191535 |
| GSE9593 | Up | 0.0907326660 |
| GSE43922 | Up | 0.3817487802 |
| GSE24585 | Down | -0.4029827265 |
| GSE37065 | Down | -0.2525007193 |
| GSE28863_A1 | Down | -0.0169912989 |
| GSE28863_A2 | Up | 0.0893537637 |
| GSE28863_A3 | Down | -0.0034975128 |
| GSE28863_A4 | Up | 0.1147626194 |
| GSE48662 | Down | -0.0370411483 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029512 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052607 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
