HCSGD entry for MNS1
1. General information
| Official gene symbol | MNS1 |
|---|---|
| Entrez ID | 55329 |
| Gene full name | meiosis-specific nuclear structural 1 |
| Other gene symbols | SPATA40 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005635 | Nuclear envelope | IEA | cellular_component |
| GO:0005882 | Intermediate filament | IEA | cellular_component |
| GO:0005930 | Axoneme | IEA | cellular_component |
| GO:0007126 | Meiosis | IEA | biological_process |
| GO:0036126 | Sperm flagellum | IEA | cellular_component |
| GO:0042802 | Identical protein binding | IDA | molecular_function |
| GO:0044782 | Cilium organization | IEA | biological_process |
| GO:0070986 | Left/right axis specification | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9616949698 | 0.0003176969 | 0.9999902473 | 0.0326644531 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.1427097700 |
| GSE13712_SHEAR | Down | -0.7782450811 |
| GSE13712_STATIC | Down | -0.4190848271 |
| GSE19018 | Down | -0.0680322058 |
| GSE19899_A1 | Down | -0.1184552471 |
| GSE19899_A2 | Down | -3.7960510926 |
| PubMed_21979375_A1 | Down | -1.0481005393 |
| PubMed_21979375_A2 | Down | -3.7390633675 |
| GSE35957 | Down | -1.4330200936 |
| GSE36640 | Down | -1.7573261485 |
| GSE54402 | Down | -0.7574430695 |
| GSE9593 | Down | -0.8543253044 |
| GSE43922 | Down | -1.8376421317 |
| GSE24585 | Up | 0.7628880024 |
| GSE37065 | Down | -0.8878739206 |
| GSE28863_A1 | Up | 0.0436059585 |
| GSE28863_A2 | Down | -0.0360689451 |
| GSE28863_A3 | Up | 0.2023231887 |
| GSE28863_A4 | Up | 0.0484381519 |
| GSE48662 | Down | -0.4194168737 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019835 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024920 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026492 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
