HCSGD entry for ZNF654

1. General information

Official gene symbolZNF654
Entrez ID55279
Gene full namezinc finger protein 654
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003677DNA bindingIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.06814779450.91479662630.56122157351.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0230354298
GSE13712_SHEARUp0.3632983861
GSE13712_STATICUp0.2148923817
GSE19018Up0.4574592012
GSE19899_A1Up0.3578865623
GSE19899_A2Up0.0364839408
PubMed_21979375_A1Up0.4260344161
PubMed_21979375_A2Up0.1792267162
GSE35957Up0.0430384539
GSE36640Down-0.0070442723
GSE54402Up0.1206137091
GSE9593Up0.0098483335
GSE43922Up0.1935560908
GSE24585Up0.7727297568
GSE37065Up0.3788655338
GSE28863_A1Down-0.1328391458
GSE28863_A2Up0.0569830417
GSE28863_A3Down-0.4035343542
GSE28863_A4Down-0.2388616342
GSE48662Down-0.0481353202

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT016826MicroarrayFunctional MTI (Weak)18185580
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.