HCSGD entry for PHF10
1. General information
| Official gene symbol | PHF10 |
|---|---|
| Entrez ID | 55274 |
| Gene full name | PHD finger protein 10 |
| Other gene symbols | BAF45A XAP135 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0007399 | Nervous system development | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0071564 | NpBAF complex | ISS | cellular_component |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9265799134 | 0.0168856464 | 0.9999902473 | 0.2542906178 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.8597592365 |
| GSE13712_SHEAR | Down | -0.0103737295 |
| GSE13712_STATIC | Up | 0.0908069770 |
| GSE19018 | Up | 0.2987802978 |
| GSE19899_A1 | Up | 0.1800190782 |
| GSE19899_A2 | Down | -0.3146613533 |
| PubMed_21979375_A1 | Up | 0.5472175063 |
| PubMed_21979375_A2 | Down | -0.2923550072 |
| GSE35957 | Down | -0.7687276406 |
| GSE36640 | Down | -1.1600184118 |
| GSE54402 | Down | -0.3364489881 |
| GSE9593 | Down | -0.6413223575 |
| GSE43922 | Up | 0.0333666007 |
| GSE24585 | Down | -0.3772216678 |
| GSE37065 | Down | -0.1465824445 |
| GSE28863_A1 | Up | 0.1231614740 |
| GSE28863_A2 | Up | 0.1404870677 |
| GSE28863_A3 | Down | -0.1944116479 |
| GSE28863_A4 | Down | -0.3726473007 |
| GSE48662 | Down | -0.3036701917 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-409-3p | MIMAT0001639 | MIRT006452 | Luciferase reporter assay//qRT-PCR//Western blot | Functional MTI | 22388101 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024283 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026603 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT028140 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-106b-3p | MIMAT0004672 | MIRT038572 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-23b-3p | MIMAT0000418 | MIRT046346 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT047753 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
