HCSGD entry for TYW1
1. General information
| Official gene symbol | TYW1 |
|---|---|
| Entrez ID | 55253 |
| Gene full name | tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) |
| Other gene symbols | RSAFD1 TYW1A YPL207W |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005506 | Iron ion binding | IEA | molecular_function |
| GO:0008033 | TRNA processing | IEA | biological_process |
| GO:0010181 | FMN binding | IEA | molecular_function |
| GO:0016491 | Oxidoreductase activity | IEA | molecular_function |
| GO:0051539 | 4 iron, 4 sulfur cluster binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0233342464 | 0.7395298279 | 0.3627449088 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.7164428096 |
| GSE13712_SHEAR | Down | -0.2897841197 |
| GSE13712_STATIC | Down | -0.0567959169 |
| GSE19018 | Down | -0.7480833532 |
| GSE19899_A1 | Up | 0.2510585267 |
| GSE19899_A2 | Up | 0.9295154687 |
| PubMed_21979375_A1 | Up | 0.8647495913 |
| PubMed_21979375_A2 | Up | 1.5922782124 |
| GSE35957 | Down | -0.2904958974 |
| GSE36640 | Up | 0.6299005017 |
| GSE54402 | Up | 0.0456253088 |
| GSE9593 | Down | -0.0302427714 |
| GSE43922 | Up | 0.6036847171 |
| GSE24585 | Down | -0.0210983219 |
| GSE37065 | Up | 0.1517343798 |
| GSE28863_A1 | Down | -0.1168131096 |
| GSE28863_A2 | Down | -0.0242145599 |
| GSE28863_A3 | Down | -0.2876444275 |
| GSE28863_A4 | Up | 0.2011344934 |
| GSE48662 | Up | 0.2191564260 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26a-5p | MIMAT0000082 | MIRT050089 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
