HCSGD entry for PCMTD2
1. General information
| Official gene symbol | PCMTD2 |
|---|---|
| Entrez ID | 55251 |
| Gene full name | protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 |
| Other gene symbols | C20orf36 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004719 | Protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2425331788 | 0.8112392880 | 0.9299221123 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2296402900 |
| GSE13712_SHEAR | Down | -0.2371940074 |
| GSE13712_STATIC | Down | -0.0535950233 |
| GSE19018 | Up | 0.4060020036 |
| GSE19899_A1 | Up | 0.3816562411 |
| GSE19899_A2 | Up | 0.0777398407 |
| PubMed_21979375_A1 | Up | 0.2143594109 |
| PubMed_21979375_A2 | Up | 0.1145243702 |
| GSE35957 | Up | 0.0592599640 |
| GSE36640 | Up | 0.4655431223 |
| GSE54402 | Down | -0.0564540144 |
| GSE9593 | Down | -0.2196260237 |
| GSE43922 | Up | 0.0148237879 |
| GSE24585 | Up | 0.3499534657 |
| GSE37065 | Down | -0.1624719758 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.1306007808 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-142-3p | MIMAT0000434 | MIRT021615 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-23b-3p | MIMAT0000418 | MIRT023481 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
