HCSGD entry for USP40

1. General information

Official gene symbolUSP40
Entrez ID55230
Gene full nameubiquitin specific peptidase 40
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0004221Ubiquitin thiolesterase activityIEAmolecular_function
GO:0006511Ubiquitin-dependent protein catabolic processIEAbiological_process
GO:0008234Cysteine-type peptidase activityIEAmolecular_function
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.30569942250.34062239280.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1358096775
GSE13712_SHEARDown-0.1000213044
GSE13712_STATICDown-0.1665357796
GSE19018Down-0.0338036442
GSE19899_A1Down-0.2622528668
GSE19899_A2Down-0.3445849302
PubMed_21979375_A1Up0.1608167527
PubMed_21979375_A2Up0.2214908352
GSE35957Up0.8305460232
GSE36640Down-0.0306274446
GSE54402Down-0.2029024315
GSE9593Up0.1141216226
GSE43922Down-0.2910534337
GSE24585Up0.1096343649
GSE37065Down-0.1592558618
GSE28863_A1Up0.8257984653
GSE28863_A2Up0.4188642988
GSE28863_A3Down-0.2494680559
GSE28863_A4Up0.0025785017
GSE48662Up0.2306487214

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-484MIMAT0002174MIRT041968CLASHFunctional MTI (Weak)23622248
Entries Per Page
Displaying Page of
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.