HCSGD entry for RAVER2
1. General information
| Official gene symbol | RAVER2 |
|---|---|
| Entrez ID | 55225 |
| Gene full name | ribonucleoprotein, PTB-binding 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0019013 | Viral nucleocapsid | IEA | cellular_component |
| GO:0030529 | Ribonucleoprotein complex | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9727353938 | 0.0174524980 | 0.9999902473 | 0.2587984225 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0430146121 |
| GSE13712_SHEAR | Down | -0.8919030295 |
| GSE13712_STATIC | Down | -0.0783652904 |
| GSE19018 | Up | 0.0997934878 |
| GSE19899_A1 | Down | -0.0455357890 |
| GSE19899_A2 | Down | -0.1166181179 |
| PubMed_21979375_A1 | Down | -0.6614610969 |
| PubMed_21979375_A2 | Down | -0.2573161971 |
| GSE35957 | Up | 0.4373251889 |
| GSE36640 | Down | -0.1480387109 |
| GSE54402 | Down | -0.3262832391 |
| GSE9593 | Down | -0.2219866156 |
| GSE43922 | Down | -1.5957012633 |
| GSE24585 | Down | -0.0578183429 |
| GSE37065 | Down | -0.3181926891 |
| GSE28863_A1 | Up | 0.0008992009 |
| GSE28863_A2 | Up | 0.2383461953 |
| GSE28863_A3 | Down | -0.6666692306 |
| GSE28863_A4 | Down | -0.3581272539 |
| GSE48662 | Up | 0.0703363744 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT001827 | Microarray//qRT-PCR//qRT-PCR;Other | Functional MTI (Weak) | 16549876 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT002305 | Immunoprecipitaion//Luciferase reporter assay//Western blot | Functional MTI | 17637574 |
| hsa-miR-99a-5p | MIMAT0000097 | MIRT002306 | Immunoprecipitaion//Luciferase reporter assay//Western blot | Functional MTI | 17637574 |
| hsa-miR-99b-5p | MIMAT0000689 | MIRT002307 | Immunoprecipitaion//Luciferase reporter assay//Western blot | Functional MTI | 17637574 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040013 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045678 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
