HCSGD entry for BBS7

1. General information

Official gene symbolBBS7
Entrez ID55212
Gene full nameBardet-Biedl syndrome 7
Other gene symbolsBBS2L1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001103RNA polymerase II repressing transcription factor bindingIPImolecular_function
GO:0001654Eye developmentIEAbiological_process
GO:0001947Heart loopingISSbiological_process
GO:0005515Protein bindingIPImolecular_function
GO:0005737CytoplasmIEAcellular_component
GO:0005813CentrosomeIDAcellular_component
GO:0006357Regulation of transcription from RNA polymerase II promoterIPIbiological_process
GO:0007224Smoothened signaling pathwayIEAbiological_process
GO:0007368Determination of left/right symmetryISSbiological_process
GO:0007420Brain developmentIEAbiological_process
GO:0007507Heart developmentIEAbiological_process
GO:0007601Visual perceptionIEAbiological_process
GO:0008104Protein localizationIEAbiological_process
GO:0015031Protein transportIEAbiological_process
GO:0032402Melanosome transportISSbiological_process
GO:0032436Positive regulation of proteasomal ubiquitin-dependent protein catabolic processIPIbiological_process
GO:0034464BBSomeIDA IEAcellular_component
GO:0045444Fat cell differentiationIEA ISSbiological_process
GO:0048546Digestive tract morphogenesisISSbiological_process
GO:0051877Pigment granule aggregation in cell centerISSbiological_process
GO:0060021Palate developmentIEAbiological_process
GO:0060170Ciliary membraneIEAcellular_component
GO:0060173Limb developmentIEAbiological_process
GO:0060271Cilium morphogenesisISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.89312690250.06091000720.99999024730.4649306756

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1017125585
GSE13712_SHEARDown-0.1253980306
GSE13712_STATICDown-0.1087670009
GSE19018Up0.2047035317
GSE19899_A1Down-0.2711083578
GSE19899_A2Up0.0631133289
PubMed_21979375_A1Down-0.0819187615
PubMed_21979375_A2Down-0.3122991151
GSE35957Up0.2720505823
GSE36640Up0.6984756199
GSE54402Down-0.2496775469
GSE9593Down-0.0939649139
GSE43922Up0.0324209336
GSE24585Up0.2802331696
GSE37065Down-0.0527075445
GSE28863_A1Down-0.3381869492
GSE28863_A2Down-0.0848130731
GSE28863_A3Down-0.7255123258
GSE28863_A4Down-0.4273088701
GSE48662Down-0.4023554273

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-215-5pMIMAT0000272MIRT024648MicroarrayFunctional MTI (Weak)19074876
hsa-miR-192-5pMIMAT0000222MIRT026140MicroarrayFunctional MTI (Weak)19074876
hsa-let-7b-5pMIMAT0000063MIRT051927CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.