HCSGD entry for SBNO1
1. General information
| Official gene symbol | SBNO1 |
|---|---|
| Entrez ID | 55206 |
| Gene full name | strawberry notch homolog 1 (Drosophila) |
| Other gene symbols | MOP3 Sno |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0430234186 | 0.9148284640 | 0.4618349918 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1398444607 |
| GSE13712_SHEAR | Down | -0.0848809320 |
| GSE13712_STATIC | Down | -0.0122225248 |
| GSE19018 | Down | -0.0275672524 |
| GSE19899_A1 | Up | 0.4093554581 |
| GSE19899_A2 | Up | 0.1386961004 |
| PubMed_21979375_A1 | Up | 0.4245246550 |
| PubMed_21979375_A2 | Up | 0.3539891454 |
| GSE35957 | Down | -0.0330097308 |
| GSE36640 | Down | -0.1953945088 |
| GSE54402 | Up | 0.4310493330 |
| GSE9593 | Down | -0.0506638752 |
| GSE43922 | Up | 0.5177014074 |
| GSE24585 | Down | -0.0288774104 |
| GSE37065 | Down | -0.0963372714 |
| GSE28863_A1 | Up | 1.1007963011 |
| GSE28863_A2 | Up | 0.6810977436 |
| GSE28863_A3 | Down | -0.4885636318 |
| GSE28863_A4 | Up | 0.0672478700 |
| GSE48662 | Down | -0.0253072459 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-188-5p | MIMAT0000457 | MIRT044901 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-218-5p | MIMAT0000275 | MIRT046997 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048283 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
