HCSGD entry for RNF220
1. General information
| Official gene symbol | RNF220 |
|---|---|
| Entrez ID | 55182 |
| Gene full name | ring finger protein 220 |
| Other gene symbols | C1orf164 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004842 | Ubiquitin-protein ligase activity | ISS | molecular_function |
| GO:0005737 | Cytoplasm | ISS | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016567 | Protein ubiquitination | ISS | biological_process |
| GO:0051865 | Protein autoubiquitination | ISS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7630742905 | 0.0871710839 | 0.9999902473 | 0.5601635986 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1170050142 |
| GSE13712_SHEAR | Down | -0.7353633662 |
| GSE13712_STATIC | Down | -0.2777355467 |
| GSE19018 | Down | -0.3709620033 |
| GSE19899_A1 | Down | -0.2948393328 |
| GSE19899_A2 | Down | -0.4047627027 |
| PubMed_21979375_A1 | Up | 1.2112136270 |
| PubMed_21979375_A2 | Down | -0.4607666967 |
| GSE35957 | Down | -0.5444530735 |
| GSE36640 | Down | -0.9989917858 |
| GSE54402 | Up | 0.2023387737 |
| GSE9593 | Up | 0.0077608200 |
| GSE43922 | Down | -0.0469625143 |
| GSE24585 | Down | -0.0091752163 |
| GSE37065 | Up | 0.1135677170 |
| GSE28863_A1 | Down | -0.0338683888 |
| GSE28863_A2 | Up | 0.1552003741 |
| GSE28863_A3 | Up | 0.1428050670 |
| GSE28863_A4 | Down | -0.0427798756 |
| GSE48662 | Up | 0.3644632103 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-93-5p | MIMAT0000093 | MIRT048901 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
