HCSGD entry for RMDN3
1. General information
| Official gene symbol | RMDN3 |
|---|---|
| Entrez ID | 55177 |
| Gene full name | regulator of microtubule dynamics 3 |
| Other gene symbols | FAM82A2 FAM82C RMD-3 RMD3 ptpip51 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000922 | Spindle pole | IEA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005739 | Mitochondrion | IDA IEA | cellular_component |
| GO:0005741 | Mitochondrial outer membrane | IDA | cellular_component |
| GO:0005874 | Microtubule | IEA | cellular_component |
| GO:0006874 | Cellular calcium ion homeostasis | IMP | biological_process |
| GO:0006915 | Apoptotic process | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030154 | Cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0145245811 | 0.9360926371 | 0.2991404538 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.9180108845 |
| GSE13712_SHEAR | Down | -0.0732950801 |
| GSE13712_STATIC | Up | 0.2585425321 |
| GSE19018 | Down | -0.8959486214 |
| GSE19899_A1 | Up | 0.0291222418 |
| GSE19899_A2 | Up | 0.7306722823 |
| PubMed_21979375_A1 | Down | -0.0122798132 |
| PubMed_21979375_A2 | Up | 1.1553039349 |
| GSE35957 | Up | 0.3545979688 |
| GSE36640 | Up | 1.9769471703 |
| GSE54402 | Up | 0.0263196012 |
| GSE9593 | Up | 0.6200823273 |
| GSE43922 | Up | 0.2874454873 |
| GSE24585 | Down | -0.0206245954 |
| GSE37065 | Up | 0.0399547227 |
| GSE28863_A1 | Up | 0.0551265585 |
| GSE28863_A2 | Up | 0.1597113327 |
| GSE28863_A3 | Down | -0.0489205352 |
| GSE28863_A4 | Up | 0.1695596847 |
| GSE48662 | Down | -0.0084146923 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019889 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT028031 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-505-5p | MIMAT0004776 | MIRT037970 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041538 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
