HCSGD entry for TMEM33
1. General information
| Official gene symbol | TMEM33 |
|---|---|
| Entrez ID | 55161 |
| Gene full name | transmembrane protein 33 |
| Other gene symbols | 1600019D15Rik SHINC3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0042470 | Melanosome | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0420973139 | 0.7139702823 | 0.4586331126 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5825779755 |
| GSE13712_SHEAR | Up | 0.0218322027 |
| GSE13712_STATIC | Up | 0.2007253751 |
| GSE19018 | Down | -1.0213232067 |
| GSE19899_A1 | Up | 0.3138081403 |
| GSE19899_A2 | Up | 0.6254321959 |
| PubMed_21979375_A1 | Up | 0.9567168364 |
| PubMed_21979375_A2 | Up | 0.7653612217 |
| GSE35957 | Up | 0.1223651693 |
| GSE36640 | Up | 0.0531223547 |
| GSE54402 | Up | 0.3015231424 |
| GSE9593 | Down | -0.0927509067 |
| GSE43922 | Up | 0.6755052383 |
| GSE24585 | Down | -0.2047388954 |
| GSE37065 | Up | 0.0830994772 |
| GSE28863_A1 | Up | 0.0311579959 |
| GSE28863_A2 | Up | 0.1679692089 |
| GSE28863_A3 | Down | -0.4036100711 |
| GSE28863_A4 | Down | -0.1717104891 |
| GSE48662 | Up | 0.0955225425 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016601 | Proteomics | Functional MTI (Weak) | 21512034 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT021042 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032486 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040248 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-328-3p | MIMAT0000752 | MIRT043766 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-191-5p | MIMAT0000440 | MIRT045784 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
