HCSGD entry for AGGF1
1. General information
| Official gene symbol | AGGF1 |
|---|---|
| Entrez ID | 55109 |
| Gene full name | angiogenic factor with G patch and FHA domains 1 |
| Other gene symbols | GPATC7 GPATCH7 HSU84971 HUS84971 VG5Q |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001525 | Angiogenesis | IEA | biological_process |
| GO:0001570 | Vasculogenesis | TAS | biological_process |
| GO:0001938 | Positive regulation of endothelial cell proliferation | IDA | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005576 | Extracellular region | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006396 | RNA processing | TAS | biological_process |
| GO:0007155 | Cell adhesion | IDA | biological_process |
| GO:0045766 | Positive regulation of angiogenesis | IDA | biological_process |
| GO:0048471 | Perinuclear region of cytoplasm | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8562280650 | 0.2380899168 | 0.9999902473 | 0.9388411536 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2280195504 |
| GSE13712_SHEAR | Down | -0.1936492715 |
| GSE13712_STATIC | Down | -0.1790919133 |
| GSE19018 | Down | -0.0591041577 |
| GSE19899_A1 | Down | -0.4411116448 |
| GSE19899_A2 | Down | -0.2074137948 |
| PubMed_21979375_A1 | Down | -0.1290024023 |
| PubMed_21979375_A2 | Down | -0.2303241195 |
| GSE35957 | Down | -0.2284936990 |
| GSE36640 | Down | -0.2193988452 |
| GSE54402 | Down | -0.0281562169 |
| GSE9593 | Up | 0.0409271681 |
| GSE43922 | Down | -0.0629127582 |
| GSE24585 | Up | 0.2023381111 |
| GSE37065 | Up | 0.0802676470 |
| GSE28863_A1 | Up | 0.3677183757 |
| GSE28863_A2 | Up | 0.3240011551 |
| GSE28863_A3 | Down | -0.0963363867 |
| GSE28863_A4 | Down | -0.0880855600 |
| GSE48662 | Down | -0.1985882197 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019345 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030831 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037003 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30a-3p | MIMAT0000088 | MIRT049919 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
