HCSGD entry for ATG2B
1. General information
| Official gene symbol | ATG2B |
|---|---|
| Entrez ID | 55102 |
| Gene full name | autophagy related 2B |
| Other gene symbols | C14orf103 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005811 | Lipid particle | IEA | cellular_component |
| GO:0006914 | Autophagy | IEA | biological_process |
| GO:0034045 | Pre-autophagosomal structure membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0830398123 | 0.9327115231 | 0.6074553209 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0655167642 |
| GSE13712_SHEAR | Up | 0.0266623674 |
| GSE13712_STATIC | Down | -0.1533727264 |
| GSE19018 | Up | 0.2183526820 |
| GSE19899_A1 | Up | 0.1918807542 |
| GSE19899_A2 | Up | 0.3098060816 |
| PubMed_21979375_A1 | Down | -0.0593533516 |
| PubMed_21979375_A2 | Up | 0.4076879938 |
| GSE35957 | Up | 0.3329649067 |
| GSE36640 | Up | 0.2288756121 |
| GSE54402 | Up | 0.0142935619 |
| GSE9593 | Up | 0.0657440113 |
| GSE43922 | Up | 0.2423432305 |
| GSE24585 | Up | 0.0581787962 |
| GSE37065 | Down | -0.2196172616 |
| GSE28863_A1 | Up | 0.6116940369 |
| GSE28863_A2 | Up | 0.7186623402 |
| GSE28863_A3 | Down | -0.2382485632 |
| GSE28863_A4 | Down | -0.0182915638 |
| GSE48662 | Down | -0.2073009026 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130a-3p | MIMAT0000425 | MIRT006259 | Luciferase reporter assay | Functional MTI | 22350415 |
| hsa-miR-421 | MIMAT0003339 | MIRT016131 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
