HCSGD entry for PPP1R7
1. General information
| Official gene symbol | PPP1R7 |
|---|---|
| Entrez ID | 5510 |
| Gene full name | protein phosphatase 1, regulatory subunit 7 |
| Other gene symbols | SDS22 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | TAS | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0008599 | Protein phosphatase type 1 regulator activity | TAS | molecular_function |
| GO:0030234 | Enzyme regulator activity | NAS | molecular_function |
| GO:0050790 | Regulation of catalytic activity | NAS TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5356525512 | 0.2538081874 | 0.9999902473 | 0.9663655866 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.0861290315 |
| GSE13712_SHEAR | Up | 0.0131808995 |
| GSE13712_STATIC | Down | -0.0129928643 |
| GSE19018 | Up | 0.0360096330 |
| GSE19899_A1 | Down | -0.1498485126 |
| GSE19899_A2 | Down | -0.1737651516 |
| PubMed_21979375_A1 | Down | -0.3675404730 |
| PubMed_21979375_A2 | Down | -0.2857980155 |
| GSE35957 | Up | 0.0016731113 |
| GSE36640 | Up | 0.3542148914 |
| GSE54402 | Up | 0.1669900622 |
| GSE9593 | Up | 0.6329366541 |
| GSE43922 | Down | -0.1105121211 |
| GSE24585 | Up | 0.0078033022 |
| GSE37065 | Down | -0.0220467028 |
| GSE28863_A1 | Down | -0.2762296845 |
| GSE28863_A2 | Down | -0.0132115965 |
| GSE28863_A3 | Down | -0.5849275337 |
| GSE28863_A4 | Down | -0.0829507027 |
| GSE48662 | Down | -0.2423640580 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT001605 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-454-3p | MIMAT0003885 | MIRT039247 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044691 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
