HCSGD entry for GPATCH1
1. General information
| Official gene symbol | GPATCH1 |
|---|---|
| Entrez ID | 55094 |
| Gene full name | G patch domain containing 1 |
| Other gene symbols | ECGP GPATC1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000398 | MRNA splicing, via spliceosome | IC | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0071013 | Catalytic step 2 spliceosome | IDA | cellular_component |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9605456898 | 0.1031047377 | 0.9999902473 | 0.6150996827 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1024535567 |
| GSE13712_SHEAR | Down | -0.2870335188 |
| GSE13712_STATIC | Up | 0.2061267340 |
| GSE19018 | Down | -0.2886009389 |
| GSE19899_A1 | Down | -0.5145058456 |
| GSE19899_A2 | Down | -0.1472497112 |
| PubMed_21979375_A1 | Down | -0.0289575800 |
| PubMed_21979375_A2 | Down | -0.4166058435 |
| GSE35957 | Down | -0.3280370861 |
| GSE36640 | Down | -0.4132989113 |
| GSE54402 | Up | 0.0138879426 |
| GSE9593 | Down | -0.1522302635 |
| GSE43922 | Down | -0.0147070360 |
| GSE24585 | Up | 0.0351842032 |
| GSE37065 | Down | -0.0543515504 |
| GSE28863_A1 | Up | 0.0389714515 |
| GSE28863_A2 | Down | -0.1839682023 |
| GSE28863_A3 | Down | -0.2914266885 |
| GSE28863_A4 | Up | 0.0769341958 |
| GSE48662 | Up | 0.0431120521 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT052087 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
