HCSGD entry for SOBP
1. General information
| Official gene symbol | SOBP |
|---|---|
| Entrez ID | 55084 |
| Gene full name | sine oculis binding protein homolog (Drosophila) |
| Other gene symbols | JXC1 MRAMS |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0007605 | Sensory perception of sound | IEA | biological_process |
| GO:0007626 | Locomotory behavior | IEA | biological_process |
| GO:0032184 | SUMO polymer binding | IDA | molecular_function |
| GO:0042472 | Inner ear morphogenesis | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5822722199 | 0.5697333498 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0707278597 |
| GSE13712_SHEAR | Down | -0.1125154924 |
| GSE13712_STATIC | Down | -0.0011372709 |
| GSE19018 | Down | -0.2010811522 |
| GSE19899_A1 | Up | 0.0261106354 |
| GSE19899_A2 | Up | 0.1072530828 |
| PubMed_21979375_A1 | Up | 0.1286099018 |
| PubMed_21979375_A2 | Up | 0.0541127193 |
| GSE35957 | Down | -0.0755189020 |
| GSE36640 | Up | 0.0400048762 |
| GSE54402 | Up | 0.0490266398 |
| GSE9593 | Down | -0.1989897140 |
| GSE43922 | Up | 0.2798304239 |
| GSE24585 | Down | -0.2646976889 |
| GSE37065 | Up | 0.2338910595 |
| GSE28863_A1 | Down | -0.0183860299 |
| GSE28863_A2 | Up | 0.0920329194 |
| GSE28863_A3 | Up | 0.1497992585 |
| GSE28863_A4 | Down | -0.0242594626 |
| GSE48662 | Down | -0.0675031172 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016801 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043220 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
