HCSGD entry for C9orf40
1. General information
| Official gene symbol | C9orf40 |
|---|---|
| Entrez ID | 55071 |
| Gene full name | chromosome 9 open reading frame 40 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
Not in the Gene ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6787887580 | 0.0306533300 | 0.9999902473 | 0.3303957002 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2500302017 |
| GSE13712_SHEAR | Up | 0.9989905044 |
| GSE13712_STATIC | Up | 0.6236651429 |
| GSE19018 | Down | -0.1562286625 |
| GSE19899_A1 | Down | -0.1491337104 |
| GSE19899_A2 | Down | -0.8350331811 |
| PubMed_21979375_A1 | Down | -0.2271164385 |
| PubMed_21979375_A2 | Down | -0.7103779263 |
| GSE35957 | Down | -1.4316312629 |
| GSE36640 | Down | -1.4859890463 |
| GSE54402 | Up | 0.1419207399 |
| GSE9593 | Down | -0.7870686108 |
| GSE43922 | Up | 0.0472448469 |
| GSE24585 | Down | -0.0464148229 |
| GSE37065 | Down | -0.1526720713 |
| GSE28863_A1 | Down | -0.0999108101 |
| GSE28863_A2 | Up | 0.3923949885 |
| GSE28863_A3 | Up | 0.0877322902 |
| GSE28863_A4 | Up | 0.2037329109 |
| GSE48662 | Down | -0.6298182483 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016591 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT020465 | Microarray | Functional MTI (Weak) | 17242205 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT020465 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7c-5p | MIMAT0000064 | MIRT051809 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
