HCSGD entry for DET1
1. General information
| Official gene symbol | DET1 |
|---|---|
| Entrez ID | 55070 |
| Gene full name | de-etiolated homolog 1 (Arabidopsis) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9433324684 | 0.1605463394 | 0.9999902473 | 0.7737216508 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2413572589 |
| GSE13712_SHEAR | Down | -0.3870523759 |
| GSE13712_STATIC | Down | -0.4100714980 |
| GSE19018 | Down | -0.1342494306 |
| GSE19899_A1 | Down | -0.1433539288 |
| GSE19899_A2 | Down | -0.0006862060 |
| PubMed_21979375_A1 | Up | 0.0759685290 |
| PubMed_21979375_A2 | Down | -0.1093888642 |
| GSE35957 | Down | -0.1416681794 |
| GSE36640 | Down | -0.0241168576 |
| GSE54402 | Down | -0.1464805080 |
| GSE9593 | Down | -0.0005085938 |
| GSE43922 | Up | 0.0327520326 |
| GSE24585 | Down | -0.0261583825 |
| GSE37065 | Down | -0.0493166965 |
| GSE28863_A1 | Down | -0.0661554751 |
| GSE28863_A2 | Down | -0.1149309233 |
| GSE28863_A3 | Down | -0.2733336396 |
| GSE28863_A4 | Up | 0.1810078745 |
| GSE48662 | Up | 0.3038818179 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT000972 | Luciferase reporter assay | Functional MTI | 18367535 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT000972 | Reporter assay;Other | Functional MTI | 20584899 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
