HCSGD entry for TMEM248
1. General information
| Official gene symbol | TMEM248 |
|---|---|
| Entrez ID | 55069 |
| Gene full name | transmembrane protein 248 |
| Other gene symbols | C7orf42 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4577290414 | 0.1897949698 | 0.9999902473 | 0.8444708925 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3432129679 |
| GSE13712_SHEAR | Down | -0.2884886199 |
| GSE13712_STATIC | Down | -0.0593384218 |
| GSE19018 | Down | -0.0286754632 |
| GSE19899_A1 | Down | -0.7236162887 |
| GSE19899_A2 | Down | -0.4276479082 |
| PubMed_21979375_A1 | Down | -1.6545013164 |
| PubMed_21979375_A2 | Down | -0.2357276090 |
| GSE35957 | Up | 0.1236138416 |
| GSE36640 | Up | 0.2902617477 |
| GSE54402 | Down | -0.2440629124 |
| GSE9593 | Up | 0.2500815866 |
| GSE43922 | Down | -0.0065780352 |
| GSE24585 | Up | 0.1781400082 |
| GSE37065 | Up | 0.1718146874 |
| GSE28863_A1 | Up | 0.4576269440 |
| GSE28863_A2 | Up | 0.7178925378 |
| GSE28863_A3 | Down | -0.0162537022 |
| GSE28863_A4 | Down | -0.2172347578 |
| GSE48662 | Up | 0.1143146354 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT023022 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030084 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT046867 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
