HCSGD entry for CCDC40

1. General information

Official gene symbolCCDC40
Entrez ID55036
Gene full namecoiled-coil domain containing 40
Other gene symbolsCILD15
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001947Heart loopingIMPbiological_process
GO:0003351Epithelial cilium movementIMPbiological_process
GO:0003356Regulation of cilium beat frequencyIMPbiological_process
GO:0003674Molecular_functionNDmolecular_function
GO:0005737CytoplasmIEA ISScellular_component
GO:0005929CiliumIEA ISScellular_component
GO:0030324Lung developmentIEA IMPbiological_process
GO:0035469Determination of pancreatic left/right asymmetryIMPbiological_process
GO:0060287Epithelial cilium movement involved in determination of left/right asymmetryIEA IMPbiological_process
GO:0070286Axonemal dynein complex assemblyIMPbiological_process
GO:0071907Determination of digestive tract left/right asymmetryIMPbiological_process
GO:0071910Determination of liver left/right asymmetryIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.65973117660.92614599750.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0652255236
GSE13712_SHEARDown-0.0444143149
GSE13712_STATICUp0.0235326811
GSE19018Up0.0528156583
GSE19899_A1Down-0.0314171390
GSE19899_A2Up0.1209917557
PubMed_21979375_A1Up0.1596497223
PubMed_21979375_A2Down-0.0601290418
GSE35957Up0.0431572232
GSE36640Up0.1362834856
GSE54402Down-0.0091011742
GSE9593Down-0.0017547328
GSE43922Up0.0452188391
GSE24585Up0.2574130055
GSE37065Up0.0715711694
GSE28863_A1Down-0.0566754999
GSE28863_A2Down-0.0668090566
GSE28863_A3Up0.2047031536
GSE28863_A4Up0.0799317293
GSE48662Up0.0235377787

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.