HCSGD entry for C20orf27
1. General information
| Official gene symbol | C20orf27 |
|---|---|
| Entrez ID | 54976 |
| Gene full name | chromosome 20 open reading frame 27 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3363364044 | 0.2157400821 | 0.9999902473 | 0.8952380104 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1467902749 |
| GSE13712_SHEAR | Down | -0.8075067893 |
| GSE13712_STATIC | Up | 0.2800121749 |
| GSE19018 | Up | 0.1150605865 |
| GSE19899_A1 | Up | 0.0212001304 |
| GSE19899_A2 | Up | 0.5333258401 |
| PubMed_21979375_A1 | Up | 0.2166966719 |
| PubMed_21979375_A2 | Up | 0.5119917672 |
| GSE35957 | Down | -0.2435717137 |
| GSE36640 | Down | -0.0560770395 |
| GSE54402 | Up | 0.1566537476 |
| GSE9593 | Down | -0.0633497111 |
| GSE43922 | Up | 0.0917710592 |
| GSE24585 | Down | -0.5363992099 |
| GSE37065 | Down | -0.2072316888 |
| GSE28863_A1 | Down | -0.0982908776 |
| GSE28863_A2 | Up | 0.0053501753 |
| GSE28863_A3 | Up | 0.1036690029 |
| GSE28863_A4 | Up | 0.0774500735 |
| GSE48662 | Down | -0.1379865902 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027009 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-320a | MIMAT0000510 | MIRT044398 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
