HCSGD entry for SDHAF2
1. General information
| Official gene symbol | SDHAF2 |
|---|---|
| Entrez ID | 54949 |
| Gene full name | succinate dehydrogenase complex assembly factor 2 |
| Other gene symbols | C11orf79 PGL2 SDH5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA IEA | cellular_component |
| GO:0006121 | Mitochondrial electron transport, succinate to ubiquinone | IMP | biological_process |
| GO:0018293 | Protein-FAD linkage | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0126365564 | 0.9696186847 | 0.2810282095 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5692129298 |
| GSE13712_SHEAR | Down | -0.0056684200 |
| GSE13712_STATIC | Up | 0.1176772828 |
| GSE19018 | Down | -0.6085016283 |
| GSE19899_A1 | Up | 0.4597354707 |
| GSE19899_A2 | Up | 0.9834596563 |
| PubMed_21979375_A1 | Up | 1.6196985860 |
| PubMed_21979375_A2 | Up | 1.1186839120 |
| GSE35957 | Down | -0.1123536095 |
| GSE36640 | Up | 0.1247472358 |
| GSE54402 | Up | 0.6232839872 |
| GSE9593 | Up | 0.0951262791 |
| GSE43922 | Up | 0.4724580600 |
| GSE24585 | Up | 0.2681673622 |
| GSE37065 | Up | 0.0555297709 |
| GSE28863_A1 | Up | 0.0439705673 |
| GSE28863_A2 | Up | 0.0121901486 |
| GSE28863_A3 | Up | 0.0822686416 |
| GSE28863_A4 | Up | 0.1046331739 |
| GSE48662 | Down | -0.1150257866 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT031763 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
