HCSGD entry for SNRK
1. General information
| Official gene symbol | SNRK |
|---|---|
| Entrez ID | 54861 |
| Gene full name | SNF related kinase |
| Other gene symbols | HSNFRK |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000287 | Magnesium ion binding | IDA IEA | molecular_function |
| GO:0004674 | Protein serine/threonine kinase activity | IDA IEA | molecular_function |
| GO:0005524 | ATP binding | IDA IEA | molecular_function |
| GO:0005634 | Nucleus | IEA ISS | cellular_component |
| GO:0006468 | Protein phosphorylation | IDA | biological_process |
| GO:0030099 | Myeloid cell differentiation | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1076203982 | 0.9552829414 | 0.6814232620 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0026653887 |
| GSE13712_SHEAR | Up | 0.4551131639 |
| GSE13712_STATIC | Up | 0.4496606615 |
| GSE19018 | Up | 0.1479828020 |
| GSE19899_A1 | Down | -0.0153593302 |
| GSE19899_A2 | Up | 0.3662985725 |
| PubMed_21979375_A1 | Up | 0.1217056949 |
| PubMed_21979375_A2 | Up | 0.4052005554 |
| GSE35957 | Down | -0.0415695119 |
| GSE36640 | Up | 0.3054980503 |
| GSE54402 | Up | 0.2040035407 |
| GSE9593 | Down | -0.0482402322 |
| GSE43922 | Up | 0.1925086417 |
| GSE24585 | Up | 0.1938469504 |
| GSE37065 | Up | 0.3064410258 |
| GSE28863_A1 | Up | 0.1882161878 |
| GSE28863_A2 | Up | 0.1980729091 |
| GSE28863_A3 | Down | -0.0777872908 |
| GSE28863_A4 | Down | -0.0695502031 |
| GSE48662 | Down | -0.5848376325 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-128-3p | MIMAT0000424 | MIRT022051 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT031002 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041578 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
