HCSGD entry for CDHR2
1. General information
| Official gene symbol | CDHR2 |
|---|---|
| Entrez ID | 54825 |
| Gene full name | cadherin-related family member 2 |
| Other gene symbols | PCDH24 PCLKC |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0007155 | Cell adhesion | IDA | biological_process |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IDA | cellular_component |
| GO:0016324 | Apical plasma membrane | IEA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030308 | Negative regulation of cell growth | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7027289541 | 0.6361632651 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1480341854 |
| GSE13712_SHEAR | Down | -0.1394951813 |
| GSE13712_STATIC | Down | -0.0894850746 |
| GSE19018 | Up | 0.0762124200 |
| GSE19899_A1 | Down | -0.2079328221 |
| GSE19899_A2 | Up | 0.0247099990 |
| PubMed_21979375_A1 | Up | 0.0478104198 |
| PubMed_21979375_A2 | Down | -0.1678793669 |
| GSE35957 | Up | 0.1342833798 |
| GSE36640 | Down | -0.0085214000 |
| GSE54402 | Up | 0.2536725182 |
| GSE9593 | Up | 0.0083587518 |
| GSE43922 | Up | 0.0243173356 |
| GSE24585 | Up | 0.1505490261 |
| GSE37065 | Down | -0.1439422193 |
| GSE28863_A1 | Down | -0.1497265295 |
| GSE28863_A2 | Up | 0.0094221545 |
| GSE28863_A3 | Up | 0.3404932547 |
| GSE28863_A4 | Up | 0.1214393274 |
| GSE48662 | Up | 0.2257839570 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018407 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
