HCSGD entry for ZNF562
1. General information
| Official gene symbol | ZNF562 |
|---|---|
| Entrez ID | 54811 |
| Gene full name | zinc finger protein 562 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0793881425 | 0.5381234224 | 0.5931238433 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2146150618 |
| GSE13712_SHEAR | Up | 0.3293505244 |
| GSE13712_STATIC | Up | 0.1173005901 |
| GSE19018 | Down | -0.3299378205 |
| GSE19899_A1 | Up | 0.2282135192 |
| GSE19899_A2 | Up | 0.3677419308 |
| PubMed_21979375_A1 | Down | -0.3455055245 |
| PubMed_21979375_A2 | Up | 0.2793747730 |
| GSE35957 | Down | -0.0533220351 |
| GSE36640 | Down | -0.4797509537 |
| GSE54402 | Up | 0.2136299332 |
| GSE9593 | Down | -0.1352149902 |
| GSE43922 | Up | 0.6227489069 |
| GSE24585 | Down | -0.6644219790 |
| GSE37065 | Up | 0.2574784826 |
| GSE28863_A1 | Up | 0.0500011445 |
| GSE28863_A2 | Down | -0.1771799927 |
| GSE28863_A3 | Up | 0.1025580188 |
| GSE28863_A4 | Up | 0.5461217961 |
| GSE48662 | Down | -0.0983437010 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-181a-5p | MIMAT0000256 | MIRT025146 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044315 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
