HCSGD entry for SAMD9
1. General information
| Official gene symbol | SAMD9 |
|---|---|
| Entrez ID | 54809 |
| Gene full name | sterile alpha motif domain containing 9 |
| Other gene symbols | C7orf5 DRIF1 NFTC OEF1 OEF2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0006596102 | 0.1431710535 | 0.0740632911 | 0.7288879157 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.7580372602 |
| GSE13712_SHEAR | Up | 2.0916249147 |
| GSE13712_STATIC | Up | 1.2259287920 |
| GSE19018 | Up | 0.8704356357 |
| GSE19899_A1 | Up | 0.2380318714 |
| GSE19899_A2 | Down | -1.3519270310 |
| PubMed_21979375_A1 | Up | 1.1613337842 |
| PubMed_21979375_A2 | Down | -0.4890237975 |
| GSE35957 | Down | -0.9863079651 |
| GSE36640 | Up | 1.1668515061 |
| GSE54402 | Down | -0.5486178010 |
| GSE9593 | Up | 0.0915373302 |
| GSE43922 | Up | 0.2177903198 |
| GSE24585 | Up | 2.2681456218 |
| GSE37065 | Up | 1.1502115731 |
| GSE28863_A1 | Up | 0.2706948648 |
| GSE28863_A2 | Up | 1.5913717609 |
| GSE28863_A3 | Down | -1.4574462450 |
| GSE28863_A4 | Down | -0.2610465492 |
| GSE48662 | Down | -0.1800646642 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028548 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
